By the end of 1st week (9/25/20): Chapter 1-Mathematical Optimization Fundamentals.
By the end of 2nd week (10/2/20): Chapter 2-LP and Duality Theory.
By the end of 3rd week (10/9/20): Chapter 3-Flux Balance Analysis and LP Problems.
By the end of 4th week (10/16/20): QFCA from Applications of convex optimization in metabolic network analysis.
By the end of 5th week (10/23/20): Metabolic network reductions from Applications of convex optimization in metabolic network analysis.
By the end of 6th week (10/30/20): Chapter 4-Modeling with Binary Variables and MILP Fundamentals.
By the end of 7th week (11/6/20): Chapter 5-Thermodynamic Analysis of Metabolic Networks.
By the end of 8th week (11/13/20): Chapter 6-Resolving Network Gaps and Growth Prediction Inconsistencies in Metabolic Networks.
By the end of 9th week (11/20/20): Chapter 7-Identification of Connected Paths to Target Metabolites.
By the end of 10th week (11/27/20): Project Milestone Report.
By the end of 11th week (12/4/20): Project Milestone Report.
By the end of 12th week (12/11/20): Chapter 8-Computational Strain Design.
By the end of 13th week (12/18/20): Chapter 9-NLP Fundamentals.
By the end of 14th week (12/25/20): Chapter 10-NLP Applications in Metabolic Networks.
By the end of 15th week (1/1/21): Chapter 11-MINLP Fundamentals and Applications.
That finishes up the formal reading assignments. Happy new year!